Nbi_g28424

Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0012573 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0012573_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g28424
Cluster	HCCA: Cluster_244

Target	Alias	Description	ECC score	Gene Family Method
Aev_g18799	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.19	OrthoFinder output from all 39 species
Aev_g18800	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 39 species
Ala_g14293	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Ala_g14294	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.12	OrthoFinder output from all 39 species
Als_g25232	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.41	OrthoFinder output from all 39 species
Cba_g10069	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.24	OrthoFinder output from all 39 species
Cba_g30738	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.12	OrthoFinder output from all 39 species
Dcu_g18178	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.25	OrthoFinder output from all 39 species
Dcu_g18179	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.19	OrthoFinder output from all 39 species
Dde_g20200	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 39 species
Dde_g29067	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 39 species
Msp_g37938	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.28	OrthoFinder output from all 39 species
Tin_g11608	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Tin_g40479	No alias	component *(uL24) of large ribosomal-subunit (LSU)...	0.13	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004424	imidazoleglycerol-phosphate dehydratase activity	IEP	HCCA
MF	GO:0004807	triose-phosphate isomerase activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006112	energy reserve metabolic process	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005756	Ribosomal_L26/L24P_euk/arc	9	122
IPR005824	KOW	53	83

External Links

No external refs found!

Nbi_g28424

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation