AT4G32980 (ATH1)


Aliases : ATH1

Description : homeobox gene 1


Gene families : OG_01_0000167 (Gene family) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G32980
Cluster HCCA cluster: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AT1G75430 BLH11 BEL1-like homeodomain 11 0.09 Gene family
AT5G02030 VAN, BLH9, RPL,... POX (plant homeobox) family protein 0.03 Gene family
GSVIVT01034073001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os02g13310 Os02g0226600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.06 Gene family
LOC_Os06g01934 Os06g0108900 No description available 0.02 Gene family
LOC_Os06g36680 Os06g0562300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
LOC_Os10g39030 Os10g0534900 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_10435446g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_76835g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Smo68227 PACid_15412797 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Smo80869 PACid_15408409 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc02g089940.3.1 Solyc02g089940.3 No description available 0.03 Gene family
Solyc08g065420.3.1 Solyc08g065420.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d033379 GRMZM2G163761 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.08 Gene family
Zm00001d033898 GRMZM2G396114 No description available 0.03 Gene family
Zm00001d038355 GRMZM2G125976 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.07 Gene family
Zm00001d042864 GRMZM2G154641 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.11 Gene family

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process RCA Arabidopsis.org
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006546 glycine catabolic process RCA Arabidopsis.org
BP GO:0006636 unsaturated fatty acid biosynthetic process RCA Arabidopsis.org
BP GO:0006733 oxidoreduction coenzyme metabolic process RCA Arabidopsis.org
BP GO:0006766 vitamin metabolic process RCA Arabidopsis.org
BP GO:0008285 negative regulation of cell proliferation IMP Arabidopsis.org
BP GO:0008652 cellular amino acid biosynthetic process RCA Arabidopsis.org
BP GO:0009072 aromatic amino acid family metabolic process RCA Arabidopsis.org
BP GO:0009106 lipoate metabolic process RCA Arabidopsis.org
BP GO:0009108 coenzyme biosynthetic process RCA Arabidopsis.org
BP GO:0009117 nucleotide metabolic process RCA Arabidopsis.org
BP GO:0009416 response to light stimulus RCA Arabidopsis.org
BP GO:0009640 photomorphogenesis IDA Arabidopsis.org
BP GO:0009695 jasmonic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy RCA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
BP GO:0010073 meristem maintenance IGI Arabidopsis.org
BP GO:0010103 stomatal complex morphogenesis RCA Arabidopsis.org
BP GO:0010227 floral organ abscission IMP Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem IMP Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Arabidopsis.org
BP GO:0010371 regulation of gibberellin biosynthetic process IMP Arabidopsis.org
BP GO:0015994 chlorophyll metabolic process RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process RCA Arabidopsis.org
BP GO:0016117 carotenoid biosynthetic process RCA Arabidopsis.org
BP GO:0016226 iron-sulfur cluster assembly RCA Arabidopsis.org
BP GO:0016556 mRNA modification RCA Arabidopsis.org
BP GO:0019216 regulation of lipid metabolic process RCA Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0019748 secondary metabolic process RCA Arabidopsis.org
BP GO:0030154 cell differentiation RCA Arabidopsis.org
BP GO:0031408 oxylipin biosynthetic process RCA Arabidopsis.org
MF GO:0043565 sequence-specific DNA binding IDA Arabidopsis.org
BP GO:0044272 sulfur compound biosynthetic process RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0048481 plant ovule development RCA Arabidopsis.org
BP GO:0048513 animal organ development RCA Arabidopsis.org
BP GO:0090470 shoot organ boundary specification IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 390 429
IPR006563 POX_dom 202 332
No external refs found!