AT4G32520 (AtSHMT3, SHM3)


Aliases : AtSHMT3, SHM3

Description : serine hydroxymethyltransferase 3


Gene families : OG_01_0000425 (Gene family) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G32520
Cluster HCCA cluster: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001130.31 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
Cre09.g411900 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.06 Gene family
MA_730617g0010 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.05 Gene family
Solyc08g065490.3.1 Solyc08g065490.3 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004372 glycine hydroxymethyltransferase activity IDA Arabidopsis.org
MF GO:0004372 glycine hydroxymethyltransferase activity ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0006164 purine nucleotide biosynthetic process RCA Arabidopsis.org
BP GO:0006544 glycine metabolic process ISS Arabidopsis.org
BP GO:0006563 L-serine metabolic process ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009536 plastid IDA Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 85 473
No external refs found!