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  5. Nbi_g28218

Nbi_g28218


Description : E3 ubiquitin ligase *(MEL) & original description: none


Gene families : OG0007227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28218
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Als_g15915 No alias E3 ubiquitin ligase *(MEL) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00636 No alias E3 ubiquitin ligase *(MEL) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 120 150
No external refs found!