AT1G22450 (ATCOX6B2, COX6B)

Aliases : ATCOX6B2, COX6B

Description : cytochrome C oxidase 6B

Gene families : OG_01_0002292 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002292_tree ,
OG_02_0002751 (LandPlants) Phylogenetic Tree(s): OG_02_0002751_tree ,
OG_03_0003248 (SeedPlants) Phylogenetic Tree(s): OG_03_0003248_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G22450
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00250560	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative...	0.04	Archaeplastida
Cre06.g304350	No alias	Cellular respiration.oxidative...	0.1	Archaeplastida
LOC_Os03g27290.1	No alias	component COX6b of cytochrome c oxidase complex	0.14	Archaeplastida
MA_206106g0010	No alias	component COX6b of cytochrome c oxidase complex	0.02	Archaeplastida
Mp4g01650.1	No alias	component COX6b of cytochrome c oxidase complex	0.02	Archaeplastida
Solyc04g074550.4.1	No alias	component COX6b of cytochrome c oxidase complex	0.05	Archaeplastida
Zm00001e001884_P002	No alias	component COX6b of cytochrome c oxidase complex	0.15	Archaeplastida
Zm00001e022949_P001	No alias	component COX6b of cytochrome c oxidase complex	0.02	Archaeplastida
Zm00001e037987_P004	No alias	component COX6b of cytochrome c oxidase complex	0.11	Archaeplastida
AMTR_s00008p00250560	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative...	0.04	LandPlants
LOC_Os03g27290.1	No alias	component COX6b of cytochrome c oxidase complex	0.1	LandPlants
Mp4g01650.1	No alias	component COX6b of cytochrome c oxidase complex	0.01	LandPlants
Solyc04g074550.4.1	No alias	component COX6b of cytochrome c oxidase complex	0.04	LandPlants
Zm00001e001884_P002	No alias	component COX6b of cytochrome c oxidase complex	0.14	LandPlants
AMTR_s00008p00250560	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative...	0.04	SeedPlants
LOC_Os03g27290.1	No alias	component COX6b of cytochrome c oxidase complex	0.1	SeedPlants
Solyc04g074550.4.1	No alias	component COX6b of cytochrome c oxidase complex	0.04	SeedPlants
Zm00001e001884_P002	No alias	component COX6b of cytochrome c oxidase complex	0.11	SeedPlants
Zm00001e022949_P001	No alias	component COX6b of cytochrome c oxidase complex	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004129	cytochrome-c oxidase activity	ISS	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009853	photorespiration	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015002	heme-copper terminal oxidase activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	None	Extended
MF	GO:0016676	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	ISS	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003213	Cyt_c_oxidase_su6B	127	186

External Links

No external refs found!

AT1G22450 (ATCOX6B2, COX6B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation