AT4G31180


Description : Class II aminoacyl-tRNA and biotin synthetases superfamily protein


Gene families : OG_01_0003764 (Gene family) Phylogenetic Tree(s): OG0003764_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G31180
Cluster HCCA cluster: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000865.32 No alias 29.1.12 protein.aa activation.aspartate-tRNA ligase... 0.01 Gene family
Cre06.g279150 No alias 29.1.12 protein.aa activation.aspartate-tRNA ligase... 0.04 Gene family
LOC_Os02g46130 Os02g0686400 29.1.12 protein.aa activation.aspartate-tRNA ligase... 0.03 Gene family
Smo84215 PACid_15415533 29.1.12 protein.aa activation.aspartate-tRNA ligase... 0.02 Gene family
Solyc05g056250.3.1 Solyc05g056250.3 29.1.12 protein.aa activation.aspartate-tRNA ligase... 0.05 Gene family
Zm00001d008975 GRMZM2G071871 29.1.12 protein.aa activation.aspartate-tRNA ligase... 0.04 Gene family
Zm00001d015168 GRMZM2G019121 29.1.12 protein.aa activation.aspartate-tRNA ligase... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000741 karyogamy RCA Arabidopsis.org
MF GO:0004815 aspartate-tRNA ligase activity ISS Arabidopsis.org
MF GO:0005524 ATP binding ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006094 gluconeogenesis RCA Arabidopsis.org
BP GO:0006096 glycolytic process RCA Arabidopsis.org
BP GO:0006422 aspartyl-tRNA aminoacylation ISS Arabidopsis.org
BP GO:0009560 embryo sac egg cell differentiation RCA Arabidopsis.org
BP GO:0009651 response to salt stress RCA Arabidopsis.org
BP GO:0046686 response to cadmium ion IEP Arabidopsis.org
BP GO:0046686 response to cadmium ion RCA Arabidopsis.org
BP GO:0051604 protein maturation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004364 aa-tRNA-synt_II 233 552
IPR004365 NA-bd_OB_tRNA 110 195
No external refs found!