AT4G30825


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0009262 (Gene family) Phylogenetic Tree(s): OG0009262_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G30825
Cluster HCCA cluster: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014050001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os09g25550 Os09g0423300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_187850g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc07g005950.3.1 Solyc07g005950.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0016556 mRNA modification RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 836 883
IPR002885 Pentatricopeptide_repeat 347 393
IPR002885 Pentatricopeptide_repeat 770 811
IPR002885 Pentatricopeptide_repeat 562 589
IPR002885 Pentatricopeptide_repeat 281 309
IPR002885 Pentatricopeptide_repeat 317 345
IPR002885 Pentatricopeptide_repeat 490 513
IPR002885 Pentatricopeptide_repeat 734 764
IPR002885 Pentatricopeptide_repeat 596 621
IPR002885 Pentatricopeptide_repeat 205 257
IPR002885 Pentatricopeptide_repeat 656 711
No external refs found!