AT4G30790


Description : INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink).


Gene families : OG_01_0005505 (Gene family) Phylogenetic Tree(s): OG0005505_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G30790
Cluster HCCA cluster: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g08350 Os02g0179800 35.2 not assigned.unknown 0.03 Gene family
Solyc07g005970.3.1 Solyc07g005970.3 35.2 not assigned.unknown 0.03 Gene family
Zm00001d015493 GRMZM2G119571 35.2 not assigned.unknown 0.06 Gene family
Zm00001d053741 GRMZM2G143445 35.2 not assigned.unknown 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019460 Atg11_C 982 1136
IPR007240 Atg17 154 492
No external refs found!