Nbi_g28068


Description : not classified & original description: none


Gene families : OG0000153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28068
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00203360 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00090p00075720 IAMT1,... Phytohormones.gibberellin.conjugation and... 0.03 OrthoFinder output from all 47 species
AT1G68040 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
AT5G37990 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Adi_g042387 GAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Als_g51335 GAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g36852 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g69008 GAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32657.t1 IAMT1, Aspi01Gene32657 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Ceric.10G041300.1 Ceric.10G041300 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.17G009100.1 Ceric.17G009100 not classified & original description: pacid=50618208... 0.02 OrthoFinder output from all 47 species
Ceric.18G084900.1 IAMT1, Ceric.18G084900 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z067600.1 IAMT1, Ceric.1Z067600 EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
GSVIVT01018904001 ATBSMT1, BSMT1 Salicylate carboxymethyltransferase OS=Clarkia breweri 0.02 OrthoFinder output from all 47 species
Gb_22487 GAMT2 SAM-dependent carboxyl methyltransferase 0.01 OrthoFinder output from all 47 species
LOC_Os01g50480.1 LOC_Os01g50480 Salicylate carboxymethyltransferase OS=Clarkia breweri... 0.02 OrthoFinder output from all 47 species
LOC_Os06g20770.1 LOC_Os06g20770 Benzoate O-methyltransferase OS=Zea mays... 0.03 OrthoFinder output from all 47 species
MA_10002583g0010 GAMT2 Gibberellic acid methyltransferase 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10425814g0010 No alias Gibberellic acid methyltransferase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10435381g0020 IAMT1 Indole-3-acetate O-methyltransferase 1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10436356g0010 GAMT2 Gibberellic acid methyltransferase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_122091g0010 GAMT2 Gibberellic acid methyltransferase 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_131287g0010 IAMT1 7-methylxanthosine synthase 1 OS=Coffea arabica... 0.03 OrthoFinder output from all 47 species
MA_3356g0010 No alias Indole-3-acetate O-methyltransferase 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_55258g0010 No alias Salicylate carboxymethyltransferase OS=Clarkia breweri... 0.02 OrthoFinder output from all 47 species
MA_93250g0010 No alias Benzoate carboxyl methyltransferase OS=Antirrhinum majus... 0.03 OrthoFinder output from all 47 species
Mp4g15440.1 IAMT1 Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp7g11980.1 IAMT1 Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g21363 GAMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Msp_g45050 GAMT1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g23150 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ore_g25276 GAMT2 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ore_g38082 IAMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g48816 GAMT2 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g44302 GAMT2 EC_2.1 transferase transferring one-carbon group &... 0.09 OrthoFinder output from all 47 species
Zm00001e036054_P001 NAMT1, Zm00001e036054 Anthranilate O-methyltransferase 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!