AT4G29410


Description : Ribosomal L28e protein family


Gene families : OG_01_0002417 (Gene family) Phylogenetic Tree(s): OG0002417_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G29410
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.93 No alias No description available 0.28 Gene family
Cre11.g467578 No alias No description available 0.39 Gene family
GSVIVT01016895001 No alias 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.43 Gene family
GSVIVT01035350001 No alias 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.1 Gene family
LOC_Os01g51020 Os01g0706500 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.04 Gene family
LOC_Os02g57540 Os02g0821200 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.33 Gene family
LOC_Os05g46430 Os05g0541900 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.12 Gene family
MA_10428490g0010 No alias 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.1 Gene family
Smo164298 PACid_15409090 No description available 0.16 Gene family
Solyc03g121330.3.1 Solyc03g121330.3 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.35 Gene family
Solyc06g062500.3.1 Solyc06g062500.3 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.38 Gene family
Solyc12g044720.2.1 Solyc12g044720.2 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.16 Gene family
Zm00001d009417 GRMZM2G088060 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.41 Gene family
Zm00001d038865 GRMZM2G394827 29.2.1.2.2.28 protein.synthesis.ribosomal... 0.44 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0009909 regulation of flower development RCA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
BP GO:0034968 histone lysine methylation RCA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029004 L28e/Mak16 8 126
No external refs found!