Nbi_g27960


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g27960
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Ala_g03303 No alias not classified & original description: none 0.05 OrthoFinder output from all 39 species
Aop_g04190 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Aop_g21766 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Aop_g23928 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aop_g68075 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 39 species
Aop_g68098 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ceric.20G006900.1 Ceric.20G006900 not classified & original description: pacid=50565918... 0.01 OrthoFinder output from all 39 species
Ceric.29G051500.1 Ceric.29G051500 not classified & original description: pacid=50625217... 0.01 OrthoFinder output from all 39 species
Dac_g19006 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dac_g29345 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dac_g30156 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dac_g30481 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g30484 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g35240 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g36659 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dac_g38568 REME1 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dac_g42996 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dde_g16364 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dde_g16374 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Len_g26566 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g07708 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Nbi_g32347 MEF19 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g02466 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g03091 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g03361 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g03414 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g12943 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g13383 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g13538 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g57874 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g57972 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Pir_g63476 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g63833 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g63866 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g63868 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g64612 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g06849 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Ppi_g07541 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g53976 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Ppi_g54649 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Ppi_g56126 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g59100 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g59322 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g20093 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g23957 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g54070 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g30433 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Tin_g35681 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 506 528
IPR002885 Pentatricopeptide_repeat 905 935
IPR002885 Pentatricopeptide_repeat 633 680
IPR002885 Pentatricopeptide_repeat 735 782
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 431 476
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 327 375
IPR002885 Pentatricopeptide_repeat 837 885
IPR002885 Pentatricopeptide_repeat 532 578
No external refs found!