- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G77010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G03880 | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G27610 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g049577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057899 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g17771 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g07360 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g25829 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g30845 | CRR22 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Als_g19186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55327 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g57640 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g06037 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27896 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g09609 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g28410 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g38034 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene12870.t1 | Aspi01Gene12870 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34087.t1 | OTP86, Aspi01Gene34087 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54997.t1 | CRK8, Aspi01Gene54997 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene60910.t1 | Aspi01Gene60910 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20724 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75350 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.06G074600.1 | Ceric.06G074600 | not classified & original description: pacid=50619733... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.10G014900.1 | Ceric.10G014900 | not classified & original description: pacid=50613343... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G015200.1 | Ceric.11G015200 | not classified & original description: pacid=50595684... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G085300.1 | Ceric.11G085300 | not classified & original description: pacid=50596385... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G056400.1 | Ceric.15G056400 | not classified & original description: pacid=50639467... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G021300.1 | Ceric.20G021300 | not classified & original description: pacid=50566784... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g06637 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30493 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05745 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06332 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g07608 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08312 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g17188 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g19445 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g48080 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g50140 | OTP86 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g13218 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23517 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46821 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g23273 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009574001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g60250.1 | LOC_Os01g60250 | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g02850.1 | OTP84, LOC_Os04g02850 | RNA editing factor (OTP84) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g58980.1 | LOC_Os04g58980 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g27790.1 | REME1, LOC_Os06g27790 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g40860.1 | LOC_Os06g40860 | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g02280.1 | LOC_Os07g02280 | RNA editing factor (OTP80) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g47370.1 | LOC_Os07g47370 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g29360.1 | OTP82, LOC_Os11g29360 | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04970 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07802 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_116442g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_653417g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_82569g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
| MA_89214g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_904305g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g41038 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08941 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26690 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12243 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13499 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16158 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10335 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13349 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53286 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g59330 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010845 | No alias | not classified & original description: CDS=1-381 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0124.g021590 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2022 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021932 | No alias | not classified & original description: CDS=1-3567 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0243.g026662 | No alias | not classified & original description: CDS=264-2522 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26415 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g37902 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g44172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo131643 | EMB2758 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Smo61782 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
| Smo98551 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g081560.2.1 | Solyc01g081560 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114660.1.1 | Solyc03g114660 | Pentatricopeptide repeat-containing protein At1g18485... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g062820.1.1 | Solyc07g062820 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35668 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g35670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013232_P001 | Zm00001e013232 | Pentatricopeptide repeat-containing protein At2g36730... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e014549_P001 | CRR22, Zm00001e014549 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032242_P001 | Zm00001e032242 | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032485_P001 | EMB2744, Zm00001e032485 | Pentatricopeptide repeat-containing protein At5g39680... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041987_P001 | Zm00001e041987 | Pentatricopeptide repeat-containing protein At2g37320... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 108 | 155 |
| IPR002885 | Pentatricopeptide_repeat | 517 | 564 |
| IPR002885 | Pentatricopeptide_repeat | 210 | 257 |
| IPR002885 | Pentatricopeptide_repeat | 312 | 360 |
| IPR002885 | Pentatricopeptide_repeat | 414 | 462 |
| IPR002885 | Pentatricopeptide_repeat | 185 | 208 |
| IPR002885 | Pentatricopeptide_repeat | 584 | 615 |
| No external refs found! |