AT4G28590


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).


Gene families : OG_01_0003276 (Gene family) Phylogenetic Tree(s): OG0003276_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G28590
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038258001 No alias 35.2 not assigned.unknown Thioredoxin superfamily protein 0.1 Gene family
LOC_Os01g61320 Os01g0829000 35.2 not assigned.unknown 0.11 Gene family
LOC_Os05g34470 Os05g0417200,... 35.2 not assigned.unknown Thioredoxin superfamily protein 0.06 Gene family
Smo404435 PACid_15410201 35.2 not assigned.unknown Thioredoxin superfamily... 0.02 Gene family
Solyc02g079730.3.1 Solyc02g079730.3 35.2 not assigned.unknown 0.16 Gene family
Solyc04g071420.3.1 Solyc04g071420.3 35.2 not assigned.unknown Thioredoxin superfamily protein 0.06 Gene family
Zm00001d043009 GRMZM2G006229 35.2 not assigned.unknown 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated IMP Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009658 chloroplast organization IMP Arabidopsis.org
CC GO:0042644 chloroplast nucleoid IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!