Cre04.g231222


Description : 1.3.13 PS.calvin cycle.rubisco interacting Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. chaperonin-60alpha (CPN60A)


Gene families : OG_01_0000305 (Gene family) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre04.g231222
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.01 Gene family
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.07 Gene family
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.09 Gene family
AT5G18820 EMB3007 TCP-1/cpn60 chaperonin family protein 0.03 Gene family
GSVIVT01025490001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.1 Gene family
GSVIVT01029025001 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
GSVIVT01031526001 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.06 Gene family
LOC_Os06g02380 Os06g0114000 No description available 0.1 Gene family
LOC_Os10g32550 Os10g0462900 29.6 protein.folding mitochondrial chaperonin HSP.... 0.01 Gene family
LOC_Os12g17910 Os12g0277500 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.05 Gene family
MA_10436324g0010 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
MA_97627g0010 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.04 Gene family
Smo165043 PACid_15410433 No description available 0.04 Gene family
Smo168153 PACid_15419933 No description available 0.02 Gene family
Solyc01g028810.3.1 Solyc01g028810.3 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.06 Gene family
Solyc03g120850.3.1 Solyc03g120850.3 No description available 0.02 Gene family
Solyc09g091180.3.1 Solyc09g091180.3 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
Solyc11g069790.2.1 Solyc11g069790.2 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.06 Gene family
Zm00001d014090 GRMZM2G111477,... 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
Zm00001d032789 GRMZM2G416120 29.6 protein.folding mitochondrial chaperonin HSP.... 0.02 Gene family
Zm00001d034919 GRMZM2G434173 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.02 Gene family
Zm00001d035937 GRMZM2G095252,... No description available 0.02 Gene family
Zm00001d038857 GRMZM2G074790 29.6 protein.folding heat shock protein 60-3A (HSP60-3A) 0.02 Gene family
Zm00001d045544 GRMZM2G083716 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005044 scavenger receptor activity IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 561 980
IPR002423 Cpn60/TCP-1 56 173
IPR001190 SRCR 488 526
No external refs found!