AT1G22060


Description : LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).


Gene families : OG_01_0000920 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000920_tree ,
OG_02_0000667 (LandPlants) Phylogenetic Tree(s): OG_02_0000667_tree ,
OG_03_0003696 (SeedPlants) Phylogenetic Tree(s): OG_03_0003696_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22060
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01008970001 No alias No description available 0.08 Archaeplastida
GSVIVT01008971001 No alias No description available 0.08 Archaeplastida
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os03g01710.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os10g21940.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os10g36060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g39950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10431386g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10437003g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_180303g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_9751268g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp4g12160.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c17_1340V3.1 No alias No annotation 0.06 Archaeplastida
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e004411_P002 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e012583_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018560_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
AMTR_s00009p00257000 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01008970001 No alias No description available 0.06 LandPlants
GSVIVT01008971001 No alias No description available 0.08 LandPlants
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os03g01710.1 No alias no hits & (original description: none) 0.08 LandPlants
LOC_Os10g21940.1 No alias no hits & (original description: none) 0.12 LandPlants
LOC_Os10g36060.1 No alias no hits & (original description: none) 0.05 LandPlants
MA_10431386g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_180303g0010 No alias no hits & (original description: none) 0.07 LandPlants
MA_9751268g0010 No alias no hits & (original description: none) 0.04 LandPlants
Mp4g12160.1 No alias no hits & (original description: none) 0.04 LandPlants
Pp3c17_1340V3.1 No alias No annotation 0.05 LandPlants
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 LandPlants
Solyc04g072630.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e004411_P002 No alias no hits & (original description: none) 0.07 LandPlants
Zm00001e012583_P001 No alias no hits & (original description: none) 0.07 LandPlants
Zm00001e018560_P002 No alias no hits & (original description: none) 0.05 LandPlants
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 SeedPlants
GSVIVT01008970001 No alias No description available 0.05 SeedPlants
GSVIVT01008971001 No alias No description available 0.06 SeedPlants
LOC_Os10g21940.1 No alias no hits & (original description: none) 0.11 SeedPlants
MA_180303g0010 No alias no hits & (original description: none) 0.05 SeedPlants
MA_9751268g0010 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc04g072630.4.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e018560_P002 No alias no hits & (original description: none) 0.07 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019448 NT-C2 11 140
No external refs found!