Description : component *(uL15) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001601_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00069p00158350 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00130p00058120 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT1G23290 | RPL27AB, RPL27A | Ribosomal protein L18e/L15 superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT1G70600 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
Adi_g128537 | RPL27AB, RPL27A | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g06147 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g21837 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0167.g054511 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cre02.g115200 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01007667001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032405001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
Gb_05659 | No alias | component RPL27a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g42170.1 | RPL27AB, RPL27A,... | component RPL27a of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g25920 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
MA_102140g0020 | No alias | component RPL27a of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
MA_10436259g0020 | No alias | component RPL27a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Mp1g15440.1 | No alias | component RPL27a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Mp5g00120.1 | No alias | component RPL27a of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g40282 | RPL27AB, RPL27A | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c16_22430V3.1 | Pp3c16_22430 | Ribosomal protein L18e/L15 superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c20_18830V3.1 | Pp3c20_18830 | Ribosomal protein L18e/L15 superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c23_8220V3.1 | Pp3c23_8220 | Ribosomal protein L18e/L15 superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c25_13260V3.1 | Pp3c25_13260 | Ribosomal protein L18e/L15 superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Pp3c6_3470V3.1 | Pp3c6_3470 | Ribosomal protein L18e/L15 superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Pp3c8_5770V3.1 | Pp3c8_5770 | Ribosomal protein L18e/L15 superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Sam_g14847 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g25032 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g25695 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g48454 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Smo165371 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g112360.1.1 | Solyc03g112360 | component RPL27a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Spa_g03362 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g02964 | No alias | component *(uL15) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e010753_P001 | Zm00001e010753 | component RPL27a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e035537_P001 | Zm00001e035537 | component RPL27a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006525 | arginine metabolic process | IEP | HCCA |
BP | GO:0006526 | arginine biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007029 | endoplasmic reticulum organization | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021131 | Ribosomal_L18e/L15P | 28 | 141 |
No external refs found! |