MA_933431g0010


Description : Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana (sp|q9ln22|ppr54_arath : 551.0)


Gene families : OG_01_0000152 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000152_tree ,
OG_02_0000102 (LandPlants) Phylogenetic Tree(s): OG_02_0000102_tree ,
OG_03_0009795 (SeedPlants) Phylogenetic Tree(s): OG_03_0009795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_933431g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00261890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g62470,... 0.02 Archaeplastida
AMTR_s00011p00263440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g77360,... 0.02 Archaeplastida
AMTR_s00019p00029790 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g80880,... 0.03 Archaeplastida
AMTR_s00022p00121040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g77360,... 0.03 Archaeplastida
AMTR_s00022p00129420 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
AMTR_s00078p00045650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g52640,... 0.02 Archaeplastida
AMTR_s00105p00044870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71060,... 0.02 Archaeplastida
AMTR_s00119p00029960 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g15010,... 0.05 Archaeplastida
GSVIVT01027384001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.02 Archaeplastida
GSVIVT01029740001 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.02 Archaeplastida
Gb_08432 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.05 Archaeplastida
Gb_11871 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.05 Archaeplastida
Gb_12501 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 Archaeplastida
Gb_13617 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 Archaeplastida
Gb_19758 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_41835 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.06 Archaeplastida
LOC_Os01g60010.1 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.05 Archaeplastida
LOC_Os02g48122.1 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.01 Archaeplastida
LOC_Os03g51840.1 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.02 Archaeplastida
LOC_Os08g28180.1 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.11 Archaeplastida
LOC_Os09g37070.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.02 Archaeplastida
MA_6218g0010 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 Archaeplastida
Solyc09g082390.3.1 No alias Pentatricopeptide repeat-containing protein At3g22670,... 0.05 Archaeplastida
Zm00001e005553_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e015617_P001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 Archaeplastida
AMTR_s00019p00029790 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g80880,... 0.03 LandPlants
AMTR_s00022p00121040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g77360,... 0.03 LandPlants
AMTR_s00022p00129420 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
AMTR_s00078p00045650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g52640,... 0.02 LandPlants
AMTR_s00105p00044870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71060,... 0.02 LandPlants
AMTR_s00119p00029960 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g15010,... 0.05 LandPlants
GSVIVT01029740001 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.02 LandPlants
Gb_08432 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.05 LandPlants
Gb_13617 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 LandPlants
Gb_19758 No alias Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
Gb_41835 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.06 LandPlants
LOC_Os01g60010.1 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.04 LandPlants
LOC_Os03g51840.1 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.02 LandPlants
LOC_Os08g28180.1 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.11 LandPlants
LOC_Os09g37070.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.02 LandPlants
Solyc09g082390.3.1 No alias Pentatricopeptide repeat-containing protein At3g22670,... 0.05 LandPlants
LOC_Os09g37070.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 104 148
IPR002885 Pentatricopeptide_repeat 204 253
IPR002885 Pentatricopeptide_repeat 379 428
IPR002885 Pentatricopeptide_repeat 274 323
IPR002885 Pentatricopeptide_repeat 174 200
No external refs found!