AT4G27280


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0000741 (Gene family) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G27280
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013226001 No alias 30.3 signalling.calcium Encodes a PINOID (PID)-binding... 0.02 Gene family
LOC_Os06g46950 Os06g0683400 30.3 signalling.calcium Calcium-binding EF-hand family protein 0.04 Gene family
MA_10168324g0010 No alias 30.3 signalling.calcium Calcium-binding EF-hand family protein 0.04 Gene family
MA_48747g0010 No alias 30.3 signalling.calcium Calcium-binding EF-hand family protein 0.03 Gene family
Solyc07g053050.1.1 Solyc07g053050.1 30.3 signalling.calcium Calcium-binding EF-hand family protein 0.03 Gene family
Solyc10g006660.3.1 Solyc10g006660.3 30.3 signalling.calcium Calcium-binding EF-hand family protein 0.06 Gene family
Solyc10g006700.1.1 Solyc10g006700.1 30.3 signalling.calcium Calcium-binding EF-hand family protein 0.07 Gene family
Zm00001d014491 No alias 30.3 signalling.calcium Calcium-binding EF-hand family protein 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Arabidopsis.org
CC GO:0005886 plasma membrane ISM Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009612 response to mechanical stimulus RCA Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0080167 response to karrikin IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 50 103
No external refs found!