MA_93221g0010


Description : cyclin (CYCD)


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0000382 (LandPlants) Phylogenetic Tree(s): OG_02_0000382_tree ,
OG_03_0000715 (SeedPlants) Phylogenetic Tree(s): OG_03_0000715_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_93221g0010
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.04 Archaeplastida
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.04 Archaeplastida
AT4G37630 CYCD5;1 cyclin d5;1 0.02 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.07 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 Archaeplastida
Gb_02122 No alias cyclin (CYCD) 0.05 Archaeplastida
Gb_03361 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.05 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.07 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.06 Archaeplastida
Smo412774 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
Solyc02g064860.3.1 No alias Cyclin-D3-3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g064900.3.1 No alias cyclin (CYCD) 0.02 Archaeplastida
Solyc02g092980.3.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.05 Archaeplastida
Solyc12g087900.2.1 No alias cyclin (CYCD) 0.02 Archaeplastida
Solyc12g088650.2.1 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e000749_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.06 Archaeplastida
Zm00001e023829_P003 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.06 Archaeplastida
Zm00001e034405_P005 No alias cyclin (CYCD) 0.04 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.04 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 LandPlants
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.04 LandPlants
GSVIVT01003610001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 LandPlants
GSVIVT01009139001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 LandPlants
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
Gb_02122 No alias cyclin (CYCD) 0.04 LandPlants
Gb_03361 No alias cyclin (CYCD) 0.02 LandPlants
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.02 LandPlants
MA_114375g0010 No alias cyclin (CYCD) 0.03 LandPlants
Smo412774 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
Zm00001e023829_P003 No alias cyclin (CYCD) 0.03 LandPlants
Zm00001e034405_P005 No alias cyclin (CYCD) 0.02 LandPlants
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.02 SeedPlants
GSVIVT01003610001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
GSVIVT01009139001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 SeedPlants
Gb_02122 No alias cyclin (CYCD) 0.04 SeedPlants
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.02 SeedPlants
MA_114375g0010 No alias cyclin (CYCD) 0.02 SeedPlants
Zm00001e023829_P003 No alias cyclin (CYCD) 0.03 SeedPlants
Zm00001e034405_P005 No alias cyclin (CYCD) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 58 187
IPR004367 Cyclin_C-dom 190 297
No external refs found!