AT4G26090 (RPS2)

Aliases : RPS2

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_01_0000040 (Gene family) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT4G26090
Cluster	HCCA cluster: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AT1G12220	RPS5	Disease resistance protein (CC-NBS-LRR class) family	0.04	Gene family
AT1G12280	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	Gene family
AT1G12290	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Gene family
AT1G51480	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	Gene family
AT1G61190	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.06	Gene family
AT1G61300	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.06	Gene family
AT1G61310	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	Gene family
AT4G27190	No alias	NB-ARC domain-containing disease resistance protein	0.03	Gene family
AT5G43730	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	Gene family
AT5G47260	No alias	ATP binding;GTP binding;nucleotide...	0.05	Gene family
GSVIVT01014595001	No alias	20.1.7 stress.biotic.PR-proteins NB-ARC...	0.02	Gene family
GSVIVT01017229001	No alias	20.1.7 stress.biotic.PR-proteins LRR and NB-ARC...	0.02	Gene family
GSVIVT01023203001	No alias	20.1.7 stress.biotic.PR-proteins NB-ARC...	0.03	Gene family
GSVIVT01038404001	No alias	No description available	0.02	Gene family
GSVIVT01038446001	No alias	20.1.7 stress.biotic.PR-proteins P-loop containing...	0.02	Gene family
LOC_Os04g39460	Os04g0470500	20.1 stress.biotic Encodes a plasma membrane protein...	0.04	Gene family
LOC_Os04g43440	Os04g0514600	20.1 stress.biotic Encodes a plasma membrane protein...	0.03	Gene family
MA_10059887g0010	No alias	20.1 stress.biotic Resistance gene, mediates resistance...	0.02	Gene family
MA_10427559g0010	No alias	20.1.7 stress.biotic.PR-proteins NB-ARC...	0.02	Gene family
MA_10436071g0020	No alias	No description available	0.04	Gene family
MA_129554g0020	No alias	20.1.7 stress.biotic.PR-proteins LRR and NB-ARC...	0.02	Gene family
MA_355252g0010	No alias	20.1.7 stress.biotic.PR-proteins Encodes a plasma...	0.02	Gene family
MA_5216516g0010	No alias	No description available	0.02	Gene family
MA_8365843g0010	No alias	20.1.7 stress.biotic.PR-proteins NB-ARC...	0.02	Gene family
MA_895110g0010	No alias	20.1.7 stress.biotic.PR-proteins Resistance gene,...	0.02	Gene family
Solyc08g013970.2.1	Solyc08g013970.2	20.1.7 stress.biotic.PR-proteins NB-ARC...	0.03	Gene family
Zm00001d003048	GRMZM2G032602	20.1 stress.biotic Encodes a plasma membrane protein...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	RCA	Arabidopsis.org
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Arabidopsis.org
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Arabidopsis.org
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Arabidopsis.org
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Arabidopsis.org
BP	GO:0006952	defense response	TAS	Arabidopsis.org
BP	GO:0006955	immune response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009595	detection of biotic stimulus	RCA	Arabidopsis.org
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	RCA	Arabidopsis.org
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009626	plant-type hypersensitive response	IMP	Arabidopsis.org
BP	GO:0009696	salicylic acid metabolic process	None	Extended
BP	GO:0009697	salicylic acid biosynthetic process	RCA	Arabidopsis.org
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Arabidopsis.org
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Arabidopsis.org
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Arabidopsis.org
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Arabidopsis.org
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	RCA	Arabidopsis.org
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Arabidopsis.org
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Arabidopsis.org
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016045	detection of bacterium	IMP	Arabidopsis.org
BP	GO:0016045	detection of bacterium	RCA	Arabidopsis.org
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0016999	antibiotic metabolic process	None	Extended
BP	GO:0017000	antibiotic biosynthetic process	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0023014	signal transduction by protein phosphorylation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	RCA	Arabidopsis.org
BP	GO:0031348	negative regulation of defense response	RCA	Arabidopsis.org
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	host programmed cell death induced by symbiont	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
BP	GO:0042493	response to drug	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0042742	defense response to bacterium	IMP	Arabidopsis.org
BP	GO:0042742	defense response to bacterium	RCA	Arabidopsis.org
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	RCA	Arabidopsis.org
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043900	regulation of multi-organism process	RCA	Arabidopsis.org
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045087	innate immune response	RCA	Arabidopsis.org
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046189	phenol-containing compound biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	RCA	Arabidopsis.org
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050832	defense response to fungus	RCA	Arabidopsis.org
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051193	regulation of cofactor metabolic process	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	RCA	Arabidopsis.org
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0098543	detection of other organism	None	Extended
BP	GO:0098581	detection of external biotic stimulus	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	533	593
IPR002182	NB-ARC	159	398

External Links

No external refs found!

AT4G26090 (RPS2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation