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  5. Nbi_g27545

Nbi_g27545 (CHUP1)


Aliases : CHUP1

Description : motility factor *(CHUP) & original description: none


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g27545
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00070270 CHUP1,... Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.05 OrthoFinder output from all 47 species
Ala_g13466 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22592 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046122 CHUP1 motility factor *(CHUP) & original description: CDS=88-3033 0.03 OrthoFinder output from all 47 species
Ceric.25G018000.1 CHUP1, Ceric.25G018000 motility factor *(CHUP) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g36487 CHUP1 motility factor *(CHUP) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g48663 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10742 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008227001 CHUP1 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01011966001 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.07 OrthoFinder output from all 47 species
Gb_27995 CHUP1 motility factor (CHUP) 0.06 OrthoFinder output from all 47 species
LOC_Os11g01439.1 CHUP1, LOC_Os11g01439 motility factor (CHUP) 0.06 OrthoFinder output from all 47 species
LOC_Os12g01449.1 CHUP1, LOC_Os12g01449 motility factor (CHUP) 0.05 OrthoFinder output from all 47 species
Lfl_g04239 CHUP1 motility factor *(CHUP) & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g15601 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17440 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30546 CHUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12610 CHUP1 motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12617 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02408 CHUP1 motility factor *(CHUP) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g09064 No alias motility factor *(CHUP) & original description: none 0.07 OrthoFinder output from all 47 species
Smo438117 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.05 OrthoFinder output from all 47 species
Smo438203 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.04 OrthoFinder output from all 47 species
Solyc05g009930.3.1 CHUP1, Solyc05g009930 motility factor (CHUP) 0.06 OrthoFinder output from all 47 species
Tin_g21079 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032505_P001 CHUP1, Zm00001e032505 motility factor (CHUP) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!