AT4G24840


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0005492 (Gene family) Phylogenetic Tree(s): OG0005492_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G24840
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cre09.g402750 No alias 35.2 not assigned.unknown 0.02 Gene family
GSVIVT01008523001 No alias 35.2 not assigned.unknown 0.12 Gene family
LOC_Os03g63250 Os03g0849600 35.2 not assigned.unknown 0.12 Gene family
Smo86129 PACid_15420574 No description available 0.08 Gene family
Solyc08g006660.1.1 Solyc08g006660.1 35.2 not assigned.unknown 0.17 Gene family
Zm00001d012851 GRMZM2G313460 35.2 not assigned.unknown 0.23 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005773 vacuole IDA Arabidopsis.org
CC GO:0005794 Golgi apparatus ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024602 COG_su2_N 31 163
IPR024603 COG_complex_COG2_C 591 718
No external refs found!