Nbi_g27428


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g27428

Target Alias Description ECC score Gene Family Method Actions
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G20770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g001917 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g020363 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g07321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17503 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60846 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g69416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34788.t1 CRK8, Aspi01Gene34788 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07175 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g19568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31665 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34719 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g73866 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75109 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.05G035800.1 Ceric.05G035800 not classified & original description: pacid=50577834... 0.04 OrthoFinder output from all 47 species
Ceric.07G016600.1 Ceric.07G016600 not classified & original description: pacid=50626137... 0.05 OrthoFinder output from all 47 species
Ceric.1Z131300.1 CRR22, Ceric.1Z131300 not classified & original description: pacid=50639026... 0.04 OrthoFinder output from all 47 species
Ceric.31G002400.1 Ceric.31G002400 not classified & original description: pacid=50574432... 0.03 OrthoFinder output from all 47 species
Ceric.31G044700.1 Ceric.31G044700 not classified & original description: pacid=50574022... 0.03 OrthoFinder output from all 47 species
Ceric.38G052600.1 Ceric.38G052600 not classified & original description: pacid=50580600... 0.04 OrthoFinder output from all 47 species
Dac_g09594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g24604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48863 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22601 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06035 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21824 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_32017 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.11 OrthoFinder output from all 47 species
LOC_Os11g24530.1 LOC_Os11g24530 Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
Len_g05143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14080 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17746 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23950 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07619 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38813 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g01775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30030 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g31815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06896 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g12523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g32558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09360 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g14900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.08 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g07522 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45045 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06622 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21792 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22810 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23794 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 161 184
IPR002885 Pentatricopeptide_repeat 88 110
IPR002885 Pentatricopeptide_repeat 186 233
No external refs found!