AT4G22980


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).


Gene families : OG_01_0005487 (Gene family) Phylogenetic Tree(s): OG0005487_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G22980
Cluster HCCA cluster: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010653001 No alias 35.2 not assigned.unknown Pyridoxal phosphate... 0.02 Gene family
GSVIVT01019874001 No alias 35.2 not assigned.unknown Pyridoxal phosphate... 0.05 Gene family
LOC_Os08g43180 Os08g0545000 35.2 not assigned.unknown Pyridoxal phosphate... 0.03 Gene family
Solyc03g031420.1.1 Solyc03g031420.1 35.2 not assigned.unknown Pyridoxal phosphate... 0.01 Gene family
Solyc08g080180.1.1 Solyc08g080180.1 35.2 not assigned.unknown Pyridoxal phosphate... 0.02 Gene family
Zm00001d031726 GRMZM2G175396 35.2 not assigned.unknown Pyridoxal phosphate... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin RCA Arabidopsis.org
MF GO:0003674 molecular_function ND Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
BP GO:0009697 salicylic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009863 salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0031348 negative regulation of defense response RCA Arabidopsis.org
BP GO:0045087 innate immune response RCA Arabidopsis.org
BP GO:0052542 defense response by callose deposition RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!