AT4G20820


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000072 (Gene family) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G20820
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G30700 No alias FAD-binding Berberine family protein 0.02 Gene family
AT1G30720 No alias FAD-binding Berberine family protein 0.04 Gene family
AT1G30730 No alias FAD-binding Berberine family protein 0.04 Gene family
AT2G34810 No alias FAD-binding Berberine family protein 0.01 Gene family
AT4G20830 No alias FAD-binding Berberine family protein 0.01 Gene family
AT4G20860 No alias FAD-binding Berberine family protein 0.01 Gene family
GSVIVT01020744001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
LOC_Os08g06170 Os08g0158200 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_10428737g0020 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.01 Gene family
MA_132990g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_8516716g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Solyc02g079440.2.1 Solyc02g079440.2 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Zm00001d046318 GRMZM2G080839 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity ISS Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 86 221
IPR012951 BBE 466 524
No external refs found!