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  5. MA_9172180g0010

MA_9172180g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 499.0)


Gene families : OG_01_0017249 (Archaeplastida) Phylogenetic Tree(s): OG_01_0017249_tree ,
OG_02_0000075 (LandPlants) Phylogenetic Tree(s): OG_02_0000075_tree ,
OG_03_0000024 (SeedPlants) Phylogenetic Tree(s): OG_03_0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9172180g0010
Cluster HCCA: Cluster_510

Target Alias Description ECC score Gene Family Method Actions
Gb_16102 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Gb_10985 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 LandPlants
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.06 LandPlants
Gb_32451 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 LandPlants
Gb_33374 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.03 LandPlants
Gb_40472 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 LandPlants
Gb_10985 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 SeedPlants
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.04 SeedPlants
Gb_32051 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 SeedPlants
Gb_33374 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.03 SeedPlants
Gb_35599 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 SeedPlants
Gb_40472 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 229 257
IPR002885 Pentatricopeptide_repeat 525 549
IPR002885 Pentatricopeptide_repeat 424 452
IPR002885 Pentatricopeptide_repeat 169 194
IPR002885 Pentatricopeptide_repeat 259 287
IPR002885 Pentatricopeptide_repeat 290 318
IPR002885 Pentatricopeptide_repeat 453 481
IPR002885 Pentatricopeptide_repeat 321 349
IPR002885 Pentatricopeptide_repeat 350 397
IPR002885 Pentatricopeptide_repeat 195 226
IPR002885 Pentatricopeptide_repeat 94 137
No external refs found!