AT4G17840


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0005255 (Gene family) Phylogenetic Tree(s): OG0005255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G17840
Cluster HCCA cluster: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013166001 No alias 35.2 not assigned.unknown unknown protein 0.04 Gene family
MA_10430664g0010 No alias 35.2 not assigned.unknown 0.04 Gene family
MA_10434507g0010 No alias No description available 0.02 Gene family
MA_10435404g0010 No alias 35.2 not assigned.unknown unknown protein 0.03 Gene family
Smo81979 PACid_15412204 No description available 0.02 Gene family
Solyc08g005010.3.1 Solyc08g005010.3 35.2 not assigned.unknown unknown protein 0.02 Gene family
Zm00001d025860 GRMZM2G005859 35.2 not assigned.unknown unknown protein 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003675 CAAX_protease_2 237 389
No external refs found!