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  5. Nbi_g26624

Nbi_g26624 (LSH4)


Aliases : LSH4

Description : plant-specific ALOG-type transcription factor & original description: none


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g26624

Target Alias Description ECC score Gene Family Method Actions
Ala_g06360 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g06922 LSH4 plant-specific ALOG-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g04816 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g17249 LSH4 plant-specific ALOG-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g27588 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25077.t1 LSH4, Aspi01Gene25077 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29667.t1 LSH4, Aspi01Gene29667 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene66763.t1 LSH4, Aspi01Gene66763 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g24783 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g22007 LSH4 plant-specific ALOG-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g11583 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g17976 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Mp2g00330.1 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 OrthoFinder output from all 47 species
Msp_g25188 LSH6 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g10175 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g10661 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12268 LSH6 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g32132 LSH4 plant-specific ALOG-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Solyc09g025280.1.1 LSH4, Solyc09g025280 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
Spa_g22798 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g09211 LSH6 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e016177_P002 LSH4, Zm00001e016177 Protein G1-like6 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
Zm00001e023639_P001 LSH4, Zm00001e023639 Protein G1-like6 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
Zm00001e028824_P001 LSH6, Zm00001e028824 Protein G1-like8 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006936 ALOG_dom 236 355
No external refs found!