AT4G16750


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G16750
Cluster HCCA cluster: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.02 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
GSVIVT01013923001 No alias No description available 0.04 Gene family
GSVIVT01015540001 No alias No description available 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
LOC_Os02g34270 No alias No description available 0.03 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.03 Gene family
LOC_Os03g08500 Os03g0183300 No description available 0.03 Gene family
LOC_Os03g09170 Os03g0191900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.03 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.03 Gene family
LOC_Os05g25260 Os05g0316800 No description available 0.02 Gene family
LOC_Os05g49700 Os05g0572000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os06g09390 Os06g0194000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os09g26420 Os09g0434500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_502153g0010 No alias No description available 0.03 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.03 Gene family
Solyc03g116610.3.1 Solyc03g116610.3 No description available 0.03 Gene family
Solyc03g117130.3.1 Solyc03g117130.3 No description available 0.04 Gene family
Solyc04g014530.1.1 Solyc04g014530.1 No description available 0.04 Gene family
Solyc04g050750.1.1 Solyc04g050750.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc07g049490.2.1 Solyc07g049490.2 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Solyc08g066660.1.1 Solyc08g066660.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc12g049560.2.1 Solyc12g049560.2 No description available 0.03 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.03 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d014565 No alias No description available 0.04 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.03 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.03 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.06 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d051340 GRMZM2G319786 No description available 0.04 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005634 nucleus TAS Arabidopsis.org
BP GO:0007275 multicellular organism development ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 38 88
No external refs found!