AT4G15975


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G15975
Cluster HCCA cluster: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G49230 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Gene family
AT2G27940 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.03 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.03 Gene family
Cpa|evm.model.tig00020629.137 No alias No description available 0.01 Gene family
Cpa|evm.model.tig00020934.54 No alias No description available 0.01 Gene family
GSVIVT01009098001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01020665001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.02 Gene family
LOC_Os01g60730 Os01g0822800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g46340 Os02g0688800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.04 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.03 Gene family
LOC_Os06g34400 Os06g0534900,... No description available 0.02 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.02 Gene family
LOC_Os06g34870 Os06g0539900,... No description available 0.01 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.01 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g41660 Os10g0566400 No description available 0.01 Gene family
MA_10021g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436208g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_12363g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_144298g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_152783g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_17390g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_181940g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_184439g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_214717g0010 No alias No description available 0.03 Gene family
MA_25345g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_42543g0010 No alias No description available 0.02 Gene family
MA_465316g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_61349g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_6934973g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_77628g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo172324 PACid_15411137 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo96681 PACid_15409405 No description available 0.01 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.04 Gene family
Solyc01g081040.3.1 Solyc01g081040.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g100095.1.1 Solyc01g100095.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc03g112340.1.1 Solyc03g112340.1 No description available 0.02 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc04g009780.1.1 Solyc04g009780.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc09g075320.1.1 Solyc09g075320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d008914 GRMZM2G014571 No description available 0.01 Gene family
Zm00001d014949 GRMZM2G053707 No description available 0.02 Gene family
Zm00001d016139 GRMZM2G098925 No description available 0.03 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.03 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016840 GRMZM2G460958 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d017678 GRMZM2G004480 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d017923 No alias No description available 0.03 Gene family
Zm00001d018122 GRMZM2G323013 No description available 0.02 Gene family
Zm00001d020789 GRMZM2G082653 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d021316 GRMZM2G449875 No description available 0.01 Gene family
Zm00001d023341 GRMZM2G467576 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d026021 GRMZM2G031280 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.01 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.05 Gene family
Zm00001d027983 GRMZM2G148706 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.03 Gene family
Zm00001d029806 GRMZM2G052344 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d031100 No alias No description available 0.03 Gene family
Zm00001d037019 GRMZM2G026562 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL43 0.02 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.02 Gene family
Zm00001d038420 GRMZM2G075782 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d040638 No alias No description available 0.01 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d046147 No alias No description available 0.03 Gene family
Zm00001d050514 GRMZM2G068239 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d050798 GRMZM2G044773 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d053236 GRMZM2G132531 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response RCA Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0010200 response to chitin IEP Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0035556 intracellular signal transduction RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 75 118
No external refs found!