AT4G15000


Description : Ribosomal L27e protein family


Gene families : OG_01_0002435 (Gene family) Phylogenetic Tree(s): OG0002435_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G15000
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021275.23 No alias 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.35 Gene family
Cre17.g701650 No alias 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.48 Gene family
GSVIVT01012080001 No alias 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.14 Gene family
GSVIVT01020410001 No alias 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.12 Gene family
LOC_Os02g18380 Os02g0284600 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os10g41470 Os10g0564300 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.25 Gene family
MA_3390g0010 No alias 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.19 Gene family
Smo166700 PACid_15418564 No description available 0.22 Gene family
Solyc06g073300.1.1 Solyc06g073300.1 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.35 Gene family
Solyc07g043360.1.1 Solyc07g043360.1 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.18 Gene family
Zm00001d002253 GRMZM2G302712 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.19 Gene family
Zm00001d014355 GRMZM2G366077 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.32 Gene family
Zm00001d026343 GRMZM2G326066 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.16 Gene family
Zm00001d036570 GRMZM2G016250 29.2.1.2.2.27 protein.synthesis.ribosomal... 0.13 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005622 intracellular ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 52 135
No external refs found!