Aliases : ATL3
Description : not classified & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00056p00124260 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT1G15100 | RHA2A | RING-H2 finger A2A | 0.03 | OrthoFinder output from all 47 species | |
AT3G18930 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Aob_g29275 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.03G012300.1 | BRH1, Ceric.03G012300 | not classified & original description: pacid=50572071... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g07562 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g10168 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g09730 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g26675 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g28710 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Gb_26582 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g11490.1 | LOC_Os01g11490 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g14990.1 | LOC_Os02g14990 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g05230.1 | LOC_Os11g05230 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_10428061g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g06540 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13489 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g18716 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g06664 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g10560 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g01265 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g64599 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pp3c24_7770V3.1 | Pp3c24_7770 | hypoxia-responsive family protein / zinc finger... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g01312 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g25475 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g31319 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g114190.1.1 | Solyc03g114190 | RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Solyc08g081370.1.1 | BRH1, Solyc08g081370 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g48427 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEP | HCCA |
CC | GO:0000781 | chromosome, telomeric region | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
BP | GO:0032200 | telomere organization | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0098687 | chromosomal region | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 108 | 150 |
No external refs found! |