AT4G13850 (GRP2, ATGRP2, GR-RBP2)


Aliases : GRP2, ATGRP2, GR-RBP2

Description : glycine-rich RNA-binding protein 2


Gene families : OG_01_0000053 (Gene family) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G13850
Cluster HCCA cluster: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Cre02.g079400 No alias No description available 0.03 Gene family
Cre09.g392350 No alias 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.02 Gene family
GSVIVT01025527001 No alias No description available 0.02 Gene family
GSVIVT01036082001 No alias No description available 0.03 Gene family
MA_557110g0010 No alias 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.03 Gene family
Smo140819 PACid_15409716 No description available 0.05 Gene family
Smo406315 PACid_15415256 No description available 0.03 Gene family
Zm00001d012052 GRMZM2G042118,... 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.08 Gene family
Zm00001d024675 GRMZM2G003897 27.4 RNA.RNA binding RNA-binding (RRM/RBD/RNP motifs)... 0.04 Gene family
Zm00001d041246 No alias 27.4 RNA.RNA binding Encodes a small glycine-rich RNA... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0001072 transcription antitermination factor activity, RNA binding IDA Arabidopsis.org
MF GO:0003690 double-stranded DNA binding IDA Arabidopsis.org
MF GO:0003697 single-stranded DNA binding IDA Arabidopsis.org
MF GO:0003723 RNA binding IDA Arabidopsis.org
MF GO:0003723 RNA binding ISS Arabidopsis.org
MF GO:0005507 copper ion binding IDA Arabidopsis.org
MF GO:0005524 ATP binding IDA Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006970 response to osmotic stress IMP Arabidopsis.org
BP GO:0009409 response to cold IMP Arabidopsis.org
BP GO:0009409 response to cold IGI Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009414 response to water deprivation IEP Arabidopsis.org
BP GO:0009631 cold acclimation IMP Arabidopsis.org
BP GO:0009651 response to salt stress IMP Arabidopsis.org
BP GO:0009845 seed germination IMP Arabidopsis.org
BP GO:0031564 transcription antitermination IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 37 107
No external refs found!