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Description : trans-splicing factor *(PPR4) & original description: none
Gene families : OG0007144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007144_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g059076 | No alias | trans-splicing factor *(PPR4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10932.t1 | Aspi01Gene10932 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene10935.t1 | Aspi01Gene10935 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0073.g037201 | No alias | trans-splicing factor *(PPR4) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G051700.1 | Ceric.23G051700 | trans-splicing factor *(PPR4) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10435 | No alias | trans-splicing factor *(PPR4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034651001 | No alias | Pentatricopeptide repeat-containing protein At5g04810,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10434757g0010 | No alias | Pentatricopeptide repeat-containing protein At5g04810,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06326 | No alias | trans-splicing factor *(PPR4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04509 | No alias | trans-splicing factor *(PPR4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g009730.4.1 | Solyc04g009730 | Pentatricopeptide repeat-containing protein At5g04810,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 187 | 259 |
| IPR002885 | Pentatricopeptide_repeat | 352 | 408 |
| IPR002885 | Pentatricopeptide_repeat | 781 | 828 |
| IPR002885 | Pentatricopeptide_repeat | 434 | 479 |
| IPR002885 | Pentatricopeptide_repeat | 680 | 725 |
| IPR033443 | PPR_long | 515 | 649 |
| IPR002885 | Pentatricopeptide_repeat | 750 | 779 |
| No external refs found! |