Nbi_g26176

Description : trans-splicing factor *(PPR4) & original description: none

Gene families : OG0008059 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0008059_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g26176

Target	Alias	Description	ECC score	Gene Family Method	Actions
Ceric.23G051700.1	Ceric.23G051700	trans-splicing factor *(PPR4) & original description:...	0.01	OrthoFinder output from all 39 species
Msp_g06326	No alias	trans-splicing factor *(PPR4) & original description: none	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	187	259
IPR002885	Pentatricopeptide_repeat	352	408
IPR002885	Pentatricopeptide_repeat	781	828
IPR002885	Pentatricopeptide_repeat	434	479
IPR002885	Pentatricopeptide_repeat	680	725
IPR033443	PPR_long	515	649
IPR002885	Pentatricopeptide_repeat	750	779

External Links

No external refs found!