AT4G11140 (CRF1)


Aliases : CRF1

Description : cytokinin response factor 1


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G11140
Cluster HCCA cluster: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.04 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.03 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.03 Gene family
Cre08.g364400 No alias No description available 0.03 Gene family
Cre14.g620500 No alias No description available 0.01 Gene family
GSVIVT01005747001 No alias No description available 0.03 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01017315001 No alias No description available 0.03 Gene family
GSVIVT01022076001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01026334001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01032785001 No alias No description available 0.03 Gene family
GSVIVT01036201001 No alias No description available 0.03 Gene family
LOC_Os02g10760 Os02g0202000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.04 Gene family
LOC_Os03g22170 Os03g0341000 No description available 0.02 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.03 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g41760 Os05g0497200 No description available 0.02 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.02 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.04 Gene family
MA_10020434g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_203191g0010 No alias No description available 0.02 Gene family
MA_24801g0010 No alias No description available 0.03 Gene family
MA_3073g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_3405g0010 No alias No description available 0.03 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_99821g0010 No alias No description available 0.03 Gene family
Smo38500 PACid_15415796 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo73155 PACid_15404551 No description available 0.02 Gene family
Solyc03g006320.1.1 Solyc03g006320.1 No description available 0.03 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.04 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.03 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.02 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.04 Gene family
Solyc04g007170.3.1 Solyc04g007170.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g050520.2.1 Solyc06g050520.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.03 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.02 Gene family
Solyc08g007230.2.1 Solyc08g007230.2 No description available 0.02 Gene family
Solyc08g008305.1.1 Solyc08g008305.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc08g066660.1.1 Solyc08g066660.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.03 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d009573 GRMZM2G021790 No description available 0.03 Gene family
Zm00001d010175 GRMZM2G457562 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.03 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.03 Gene family
Zm00001d020267 GRMZM2G141679 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d027924 GRMZM2G129674 No description available 0.03 Gene family
Zm00001d030862 GRMZM2G039112 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d036251 GRMZM2G328197 No description available 0.03 Gene family
Zm00001d036298 GRMZM2G119865 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d036889 GRMZM2G106591 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.02 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.04 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.02 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.02 Gene family
Zm00001d044857 GRMZM5G852704 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0006406 mRNA export from nucleus RCA Arabidopsis.org
BP GO:0006606 protein import into nucleus RCA Arabidopsis.org
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0009694 jasmonic acid metabolic process RCA Arabidopsis.org
BP GO:0009737 response to abscisic acid RCA Arabidopsis.org
BP GO:0009753 response to jasmonic acid RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy RCA Arabidopsis.org
BP GO:0009845 seed germination RCA Arabidopsis.org
BP GO:0009909 regulation of flower development RCA Arabidopsis.org
BP GO:0009933 meristem structural organization RCA Arabidopsis.org
BP GO:0010162 seed dormancy process RCA Arabidopsis.org
BP GO:0010182 sugar mediated signaling pathway RCA Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Arabidopsis.org
BP GO:0010564 regulation of cell cycle process RCA Arabidopsis.org
BP GO:0016567 protein ubiquitination RCA Arabidopsis.org
BP GO:0019915 lipid storage RCA Arabidopsis.org
BP GO:0042991 obsolete transcription factor import into nucleus IDA Arabidopsis.org
BP GO:0042991 obsolete transcription factor import into nucleus RCA Arabidopsis.org
BP GO:0048366 leaf development IMP Arabidopsis.org
BP GO:0048366 leaf development RCA Arabidopsis.org
BP GO:0048825 cotyledon development IMP Arabidopsis.org
BP GO:0048825 cotyledon development RCA Arabidopsis.org
BP GO:0050826 response to freezing RCA Arabidopsis.org
BP GO:0051301 cell division RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 86 135
No external refs found!