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  5. Nbi_g25915

Nbi_g25915 (ATLUP2, LUP2)


Aliases : ATLUP2, LUP2

Description : EC_5.4 intramolecular transferase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25915
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Ala_g28712 ATLUP2, LUP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24556.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36140.t1 Aspi01Gene36140 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z160100.1 ATLUP2, LUP2,... not classified & original description: pacid=50632874... 0.01 OrthoFinder output from all 47 species
Dde_g19615 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29334 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31336 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43954 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g34152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37330 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 41 328
IPR032696 SQ_cyclase_C 336 676
No external refs found!