AT1G20200 (HAP15, EMB2719)

Aliases : HAP15, EMB2719

Description : PAM domain (PCI/PINT associated module) protein

Gene families : OG_01_0002783 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002783_tree ,
OG_02_0002632 (LandPlants) Phylogenetic Tree(s): OG_02_0002632_tree ,
OG_03_0005170 (SeedPlants) Phylogenetic Tree(s): OG_03_0005170_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G20200
Cluster	HCCA: Cluster_262

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020614.5	No alias	Protein degradation.26S proteasome.regulatory...	0.05	Archaeplastida
Cre06.g275650	No alias	Protein degradation.26S proteasome.regulatory...	0.06	Archaeplastida
GSVIVT01024003001	No alias	Protein degradation.26S proteasome.regulatory...	0.03	Archaeplastida
LOC_Os08g43640.1	No alias	regulatory component RPN3 of 26S proteasome	0.03	Archaeplastida
LOC_Os09g37000.1	No alias	regulatory component RPN3 of 26S proteasome	0.02	Archaeplastida
Mp2g07250.1	No alias	regulatory component RPN3 of 26S proteasome	0.04	Archaeplastida
Solyc01g111710.4.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e024698_P001	No alias	regulatory component RPN3 of 26S proteasome	0.03	Archaeplastida
GSVIVT01024003001	No alias	Protein degradation.26S proteasome.regulatory...	0.03	LandPlants
LOC_Os08g43640.1	No alias	regulatory component RPN3 of 26S proteasome	0.03	LandPlants
LOC_Os09g37000.1	No alias	regulatory component RPN3 of 26S proteasome	0.02	LandPlants
Mp2g07250.1	No alias	regulatory component RPN3 of 26S proteasome	0.04	LandPlants
Smo231540	No alias	Protein degradation.26S proteasome.regulatory...	0.02	LandPlants
Solyc01g111710.4.1	No alias	no hits & (original description: none)	0.06	LandPlants
Zm00001e024698_P001	No alias	regulatory component RPN3 of 26S proteasome	0.03	LandPlants
LOC_Os08g43640.1	No alias	regulatory component RPN3 of 26S proteasome	0.03	SeedPlants
LOC_Os09g37000.1	No alias	regulatory component RPN3 of 26S proteasome	0.02	SeedPlants
Solyc01g111710.4.1	No alias	no hits & (original description: none)	0.06	SeedPlants
Zm00001e024698_P001	No alias	regulatory component RPN3 of 26S proteasome	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IDA	Interproscan
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-dependent DNA replication	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006635	fatty acid beta-oxidation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	ISS	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0030258	lipid modification	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043248	proteasome assembly	RCA	Interproscan
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	RCA	Interproscan
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:0080129	proteasome core complex assembly	RCA	Interproscan
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905368	peptidase complex	None	Extended
CC	GO:1905369	endopeptidase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000717	PCI_dom	312	417
IPR013586	26S_Psome_reg_C	421	487

External Links

No external refs found!

AT1G20200 (HAP15, EMB2719)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation