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  5. AT4G09110

AT4G09110


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G09110
Cluster HCCA cluster: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AT4G09120 No alias RING/U-box superfamily protein 0.04 Gene family
AT4G10160 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G35840 No alias RING/U-box superfamily protein 0.02 Gene family
Cpa|evm.model.tig00000950.13 No alias No description available 0.02 Gene family
Cre11.g476250 No alias No description available 0.03 Gene family
GSVIVT01008754001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01009096001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01027769001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01037651001 No alias 35.1 not assigned.no ontology RING/U-box superfamily protein 0.03 Gene family
LOC_Os02g15060 Os02g0248440 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os02g15100 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g49710 No alias No description available 0.03 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.02 Gene family
MA_117647g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_152783g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_6931619g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo101273 PACid_15401706 No description available 0.02 Gene family
Smo402335 PACid_15403450 No description available 0.04 Gene family
Solyc01g100095.1.1 Solyc01g100095.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc03g005490.3.1 Solyc03g005490.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc03g114190.1.1 Solyc03g114190.1 No description available 0.04 Gene family
Solyc06g051250.1.1 Solyc06g051250.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d002621 GRMZM2G068128 No description available 0.04 Gene family
Zm00001d046151 GRMZM2G121143 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0010043 response to zinc ion RCA Arabidopsis.org
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 122 165
No external refs found!