Nbi_g25696 (APUM23, PUM23)

Aliases : APUM23, PUM23

Description : rRNA biogenesis auxiliary factor *(APUM23) & original description: none

Gene families : OG0006067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g25696
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method	Actions
Ceric.04G089900.1	APUM23, PUM23,...	rRNA biogenesis auxiliary factor *(APUM23) & original...	0.02	OrthoFinder output from all 47 species
Cre16.g649600	No alias	RNA biosynthesis.rRNA biogenesis.APUM23 factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	376	393
IPR001313	Pumilio_RNA-bd_rpt	468	502
IPR001313	Pumilio_RNA-bd_rpt	615	644

External Links

No external refs found!