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  5. Nbi_g25552

Nbi_g25552


Description : GASA precursor polypeptide & original description: none


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g25552

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
AMTR_s00060p00095260 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
AT1G22690 No alias Gibberellin-regulated family protein 0.03 OrthoFinder output from all 47 species
AT2G18420 No alias Gibberellin-regulated family protein 0.03 OrthoFinder output from all 47 species
AT5G15230 GASA4 GAST1 protein homolog 4 0.03 OrthoFinder output from all 47 species
AT5G59845 No alias Gibberellin-regulated family protein 0.04 OrthoFinder output from all 47 species
Aev_g00312 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36519 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03520 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G054400.1 Ceric.22G054400 GASA precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G026700.1 Ceric.37G026700 GASA precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g27039 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14897 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000168001 No alias Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
GSVIVT01034476001 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
GSVIVT01034477001 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
Gb_24074 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
LOC_Os03g55290.1 LOC_Os03g55290 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Len_g45849 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40342 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
MA_10298g0010 GASA5 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
MA_190475g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_24001g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_7575249g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Msp_g08529 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02603 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17763 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60041 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61575 GASA3 GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015335 No alias GASA precursor polypeptide & original description: CDS=1460-1924 0.03 OrthoFinder output from all 47 species
Sam_g09640 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089350.3.1 Solyc02g089350 GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species
Solyc06g007910.4.1 GASA4, Solyc06g007910 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc06g069790.4.1 Solyc06g069790 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Solyc08g005620.3.1 Solyc08g005620 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 76 136
No external refs found!