AT4G01680 (MYB55, AtMYB55)


Aliases : MYB55, AtMYB55

Description : myb domain protein 55


Gene families : OG_01_0000003 (Gene family) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G01680
Cluster HCCA cluster: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.03 Gene family
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.03 Gene family
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 Gene family
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.03 Gene family
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Gene family
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.04 Gene family
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.03 Gene family
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.06 Gene family
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Gene family
GSVIVT01003662001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01004851001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01007981001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01009280001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01013126001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01015575001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01017716001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01018234001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01031496001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01035177001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g03720 Os01g0128000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g18240 Os01g0285300 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g36460 Os01g0545100 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
LOC_Os02g02370 Os02g0114800 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os02g36890 Os02g0579300 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os02g42870 Os02g0641900 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os02g51799 Os02g0754400 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
LOC_Os03g04900 Os03g0142600 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
LOC_Os03g20090 Os03g0315400 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os04g38740 Os04g0461000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os04g50770 Os04g0594100 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
LOC_Os06g02250 Os06g0112700 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
LOC_Os06g46560 Os06g0679400 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os08g33660 Os08g0433400 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os08g33940 Os08g0437300 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os08g37970 Os08g0486300 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os09g36250 Os09g0532900 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
LOC_Os09g36730 Os09g0538400 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os10g33810 Os10g0478300 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os12g33070 Os12g0515300 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
MA_10431212g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_10435380g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_128244g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_139924g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
MA_158319g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Smo84195 PACid_15414947 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Smo98669 PACid_15415274 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc01g010910.2.1 Solyc01g010910.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc01g057910.3.1 Solyc01g057910.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc01g094360.3.1 Solyc01g094360.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc02g086683.1.1 Solyc02g086683.1 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc02g089190.2.1 Solyc02g089190.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc03g119370.2.1 Solyc03g119370.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc04g056310.3.1 Solyc04g056310.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Solyc04g074170.2.1 Solyc04g074170.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g007690.2.1 Solyc05g007690.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc05g007710.3.1 Solyc05g007710.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc05g009230.2.1 Solyc05g009230.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g014290.3.1 Solyc05g014290.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g048830.3.1 Solyc05g048830.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc06g069850.3.1 Solyc06g069850.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc06g074910.3.1 Solyc06g074910.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc06g075660.3.1 Solyc06g075660.3 No description available 0.02 Gene family
Solyc07g008010.3.1 Solyc07g008010.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc08g076710.3.1 Solyc08g076710.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Solyc09g090130.3.1 Solyc09g090130.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc09g090790.3.1 Solyc09g090790.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Solyc11g069030.2.1 Solyc11g069030.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d004126 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d005760 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d009435 GRMZM2G119693 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d016952 GRMZM2G001223 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d022259 GRMZM2G150841 27.3.25 RNA.regulation of transcription.MYB domain... 0.06 Gene family
Zm00001d023282 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
Zm00001d025930 GRMZM2G001106 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d027623 GRMZM2G054111 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d028930 GRMZM2G070849 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d032206 GRMZM2G079123 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d033075 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d035918 GRMZM2G102790 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d037334 GRMZM2G048910 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d039496 GRMZM2G001875 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d040621 GRMZM2G051256 No description available 0.02 Gene family
Zm00001d043837 GRMZM5G849099 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d045560 GRMZM2G044824 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d048383 GRMZM2G089686 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d051267 GRMZM2G496770 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d051269 GRMZM2G111045 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d051788 GRMZM2G055158 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
Zm00001d052804 GRMZM2G017268 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d053124 GRMZM2G108959 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!