AT4G00990


Description : Transcription factor jumonji (jmjC) domain-containing protein


Gene families : OG_01_0000378 (Gene family) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G00990
Cluster HCCA cluster: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031115001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Zinc... 0.04 Gene family
GSVIVT01038553001 No alias No description available 0.04 Gene family
MA_103030g0010 No alias No description available 0.02 Gene family
Solyc02g078790.3.1 Solyc02g078790.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Zinc... 0.02 Gene family
Solyc03g083245.1.1 Solyc03g083245.1 No description available 0.05 Gene family
Solyc04g049140.3.1 Solyc04g049140.3 No description available 0.03 Gene family
Solyc08g065830.3.1 Solyc08g065830.3 No description available 0.02 Gene family
Zm00001d054070 GRMZM2G054162 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003347 JmjC_dom 685 781
No external refs found!