AT4G00120 (GT140, IND1, IND, EDA33)


Aliases : GT140, IND1, IND, EDA33

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000523 (Gene family) Phylogenetic Tree(s): OG0000523_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G00120
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Gene family
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Gene family
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Gene family
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Gene family
LOC_Os06g10820 Os06g0210600 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.04 Gene family
LOC_Os08g01700 Os08g0108500 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
LOC_Os08g36740 Os08g0471401 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.04 Gene family
MA_83500g0010 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
MA_88831g0010 No alias No description available 0.02 Gene family
Solyc09g005070.1.1 Solyc09g005070.1 No description available 0.04 Gene family
Solyc12g088790.2.1 Solyc12g088790.2 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Zm00001d005841 GRMZM2G414252 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.03 Gene family
Zm00001d011187 GRMZM2G164341,... No description available 0.04 Gene family
Zm00001d035027 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Zm00001d038863 GRMZM2G094892 No description available 0.02 Gene family
Zm00001d043699 GRMZM2G111666 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0010197 polar nucleus fusion IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 127 167
No external refs found!