AT3G63520 (ATCCD1, CCD1, NCED1, ATNCED1)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : carotenoid cleavage dioxygenase 1


Gene families : OG_01_0002487 (Gene family) Phylogenetic Tree(s): OG0002487_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G63520
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001071.14 No alias 16.1.4.10 secondary... 0.01 Gene family
GSVIVT01032103001 No alias 16.1.4.10 secondary... 0.03 Gene family
LOC_Os12g44310 Os12g0640600 16.1.4.10 secondary... 0.06 Gene family
MA_7919416g0010 No alias 16.1.4.10 secondary... 0.03 Gene family
Smo165469 PACid_15413546 No description available 0.03 Gene family
Smo272067 PACid_15423021 No description available 0.04 Gene family
Zm00001d048373 GRMZM2G057243 16.1.4.10 secondary... 0.08 Gene family

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005773 vacuole IDA Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005794 Golgi apparatus IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006098 pentose-phosphate shunt RCA Arabidopsis.org
BP GO:0006636 unsaturated fatty acid biosynthetic process RCA Arabidopsis.org
BP GO:0006655 phosphatidylglycerol biosynthetic process RCA Arabidopsis.org
BP GO:0009414 response to water deprivation IEP Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0010304 PSII associated light-harvesting complex II catabolic process RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process RCA Arabidopsis.org
BP GO:0016117 carotenoid biosynthetic process RCA Arabidopsis.org
BP GO:0016118 carotenoid catabolic process IDA Arabidopsis.org
BP GO:0016121 carotene catabolic process IMP Arabidopsis.org
BP GO:0016124 xanthophyll catabolic process IMP Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0044242 cellular lipid catabolic process RCA Arabidopsis.org
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 52 527
No external refs found!