Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : carotenoid cleavage dioxygenase 1

Gene families : OG_01_0002487 (Gene family) Phylogenetic Tree(s): OG0002487_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G63520
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001071.14 No alias secondary... 0.01 Gene family
GSVIVT01032103001 No alias secondary... 0.03 Gene family
LOC_Os12g44310 Os12g0640600 secondary... 0.06 Gene family
MA_7919416g0010 No alias secondary... 0.03 Gene family
Smo165469 PACid_15413546 No description available 0.03 Gene family
Smo272067 PACid_15423021 No description available 0.04 Gene family
Zm00001d048373 GRMZM2G057243 secondary... 0.08 Gene family

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IDA
CC GO:0005737 cytoplasm ISM
CC GO:0005773 vacuole IDA
CC GO:0005774 vacuolar membrane IDA
CC GO:0005794 Golgi apparatus IDA
CC GO:0005886 plasma membrane IDA
BP GO:0006098 pentose-phosphate shunt RCA
BP GO:0006636 unsaturated fatty acid biosynthetic process RCA
BP GO:0006655 phosphatidylglycerol biosynthetic process RCA
BP GO:0009414 response to water deprivation IEP
CC GO:0009506 plasmodesma IDA
BP GO:0010304 PSII associated light-harvesting complex II catabolic process RCA
BP GO:0015995 chlorophyll biosynthetic process RCA
BP GO:0016117 carotenoid biosynthetic process RCA
BP GO:0016118 carotenoid catabolic process IDA
BP GO:0016121 carotene catabolic process IMP
BP GO:0016124 xanthophyll catabolic process IMP
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA
BP GO:0044242 cellular lipid catabolic process RCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IDA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 52 527
No external refs found!