AT1G19330


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).


Gene families : OG_01_0001164 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001164_tree ,
OG_02_0000888 (LandPlants) Phylogenetic Tree(s): OG_02_0000888_tree ,
OG_03_0002206 (SeedPlants) Phylogenetic Tree(s): OG_03_0002206_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G19330
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009650001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
MA_45410g0010 No alias associated component SAP30 of histone deacetylase machineries 0.02 Archaeplastida
Pp3c20_1200V3.1 No alias No annotation 0.03 Archaeplastida
Solyc04g079930.3.1 No alias associated component SAP30 of histone deacetylase machineries 0.04 Archaeplastida
GSVIVT01009650001 No alias Chromatin organisation.histone modifications.histone... 0.03 LandPlants
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.02 LandPlants
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.02 LandPlants
Pp3c8_24880V3.1 No alias No annotation 0.02 LandPlants
Solyc04g079930.3.1 No alias associated component SAP30 of histone deacetylase machineries 0.03 LandPlants
GSVIVT01009650001 No alias Chromatin organisation.histone modifications.histone... 0.02 SeedPlants
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.02 SeedPlants
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.02 SeedPlants
Solyc04g079930.3.1 No alias associated component SAP30 of histone deacetylase machineries 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 172 225
No external refs found!