AT3G62310


Description : RNA helicase family protein


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G62310
Cluster HCCA cluster: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000984.27 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.01 Gene family
Cre24.g755347 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
GSVIVT01010362001 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.04 Gene family
MA_277016g0010 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
Solyc09g008120.3.1 Solyc09g008120.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Zm00001d028923 GRMZM2G385931 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Zm00001d039380 GRMZM2G305060 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Zm00001d045147 GRMZM2G000371,... 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0009560 embryo sac egg cell differentiation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011709 DUF1605 616 692
IPR001650 Helicase_C 269 403
IPR007502 Helicase-assoc_dom 466 554
IPR011545 DEAD/DEAH_box_helicase_dom 69 226
No external refs found!