AT3G61140 (ATSK31, ATFUS6, SK31,...)

Aliases : ATSK31, ATFUS6, SK31, CSN1, EMB78, FUS6, COP11

Description : 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain

Gene families : OG_01_0007049 (Gene family) Phylogenetic Tree(s): OG0007049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G61140
Cluster HCCA cluster: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cre05.g234300 No alias 30.11.1 signalling.light.COP9 signalosome Represses... 0.03 Gene family
LOC_Os03g02540 Os03g0116500 30.11.1 signalling.light.COP9 signalosome Represses... 0.02 Gene family
Zm00001d027359 GRMZM2G062210 30.11.1 signalling.light.COP9 signalosome Represses... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000003 reproduction RCA
BP GO:0000338 protein deneddylation TAS
MF GO:0005515 protein binding IPI
CC GO:0005634 nucleus IDA
CC GO:0005634 nucleus ISS
CC GO:0005634 nucleus ISM
CC GO:0005829 cytosol IDA
BP GO:0006325 chromatin organization RCA
BP GO:0006972 hyperosmotic response IEP
BP GO:0007062 sister chromatid cohesion RCA
BP GO:0007131 reciprocal meiotic recombination RCA
CC GO:0008180 COP9 signalosome IPI
CC GO:0008180 COP9 signalosome TAS
BP GO:0009640 photomorphogenesis RCA
BP GO:0009640 photomorphogenesis TAS
BP GO:0009646 response to absence of light IEP
BP GO:0009651 response to salt stress IEP
BP GO:0009793 embryo development ending in seed dormancy IMP
BP GO:0009793 embryo development ending in seed dormancy RCA
BP GO:0009845 seed germination RCA
BP GO:0009880 embryonic pattern specification RCA
BP GO:0009909 regulation of flower development RCA
BP GO:0009933 meristem structural organization RCA
BP GO:0010072 primary shoot apical meristem specification RCA
BP GO:0010090 trichome morphogenesis RCA
BP GO:0010162 seed dormancy process RCA
BP GO:0010182 sugar mediated signaling pathway RCA
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA
BP GO:0010431 seed maturation RCA
BP GO:0010564 regulation of cell cycle process RCA
BP GO:0010638 positive regulation of organelle organization RCA
BP GO:0016567 protein ubiquitination RCA
BP GO:0016571 histone methylation RCA
BP GO:0016579 protein deubiquitination RCA
BP GO:0019915 lipid storage RCA
BP GO:0033044 regulation of chromosome organization RCA
BP GO:0045595 regulation of cell differentiation RCA
BP GO:0045893 positive regulation of transcription, DNA-templated RCA
BP GO:0048366 leaf development RCA
BP GO:0048825 cotyledon development RCA
BP GO:0050826 response to freezing RCA
BP GO:0051301 cell division RCA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000717 PCI_dom 294 395
IPR019585 Rpn7/CSN1 104 278
No external refs found!