AT3G61110 (ARS27A, RS27A)


Aliases : ARS27A, RS27A

Description : ribosomal protein S27


Gene families : OG_01_0001236 (Gene family) Phylogenetic Tree(s): OG0001236_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G61110
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001299.2 No alias 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.12 Gene family
Cre12.g529400 No alias 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.19 Gene family
GSVIVT01001113001 No alias 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.2 Gene family
GSVIVT01032964001 No alias 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.1 Gene family
LOC_Os02g27769 Os02g0478700 No description available 0.21 Gene family
LOC_Os04g27860 Os04g0346100 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.12 Gene family
LOC_Os04g32710 Os04g0399000 No description available 0.07 Gene family
Smo163947 PACid_15411468 No description available 0.16 Gene family
Solyc01g008090.3.1 Solyc01g008090.3 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.18 Gene family
Solyc06g068710.3.1 Solyc06g068710.3 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.14 Gene family
Zm00001d013282 GRMZM2G132121 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.18 Gene family
Zm00001d016491 GRMZM2G377600 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.07 Gene family
Zm00001d053239 GRMZM2G066222 29.2.1.2.1.27 protein.synthesis.ribosomal... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0009664 plant-type cell wall organization RCA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
BP GO:0042545 cell wall modification RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!