Nbi_g24718 (TUB6)

Aliases : TUB6

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g24718

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00184840	evm_27.TU.AmTr_v1...	Tubulin beta-4 chain OS=Eleusine indica	0.02	OrthoFinder output from all 47 species
Als_g10859	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Cba_g07119	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dde_g42464	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g09390.1	TUB8	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Pir_g02530	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Pir_g19218	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789	TUB6	not classified & original description: CDS=157-1053	0.02	OrthoFinder output from all 47 species
Sam_g40899	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Zm00001e025464_P001	TUB6, Zm00001e025464	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Zm00001e037773_P002	TUB2, Zm00001e037773	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0051287	NAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	3	211
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382

External Links

No external refs found!