AT3G60820 (PBF1)


Aliases : PBF1

Description : N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein


Gene families : OG_01_0003741 (Gene family) Phylogenetic Tree(s): OG0003741_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G60820
Cluster HCCA cluster: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.5 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Cre26.g756797 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.09 Gene family
GSVIVT01027613001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
LOC_Os09g32800 Os09g0505600 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
Smo94273 PACid_15422737 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Solyc02g084920.3.1 Solyc02g084920.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.11 Gene family
Zm00001d006085 GRMZM5G817037 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
Zm00001d021051 GRMZM2G074386 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005839 proteasome core complex TAS Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006094 gluconeogenesis RCA Arabidopsis.org
BP GO:0006096 glycolytic process RCA Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Arabidopsis.org
BP GO:0006635 fatty acid beta-oxidation RCA Arabidopsis.org
MF GO:0008233 peptidase activity ISS Arabidopsis.org
BP GO:0009407 toxin catabolic process RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
BP GO:0009651 response to salt stress RCA Arabidopsis.org
BP GO:0009817 defense response to fungus, incompatible interaction IDA Arabidopsis.org
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0043248 proteasome assembly RCA Arabidopsis.org
BP GO:0046686 response to cadmium ion RCA Arabidopsis.org
CC GO:0048046 apoplast IDA Arabidopsis.org
BP GO:0051788 response to misfolded protein RCA Arabidopsis.org
BP GO:0080129 proteasome core complex assembly RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 13 207
No external refs found!